CRAN/E | R Packages from Scott Chamberlain

Scott Chamberlain

Author of 95 R packages

Quick info

Scott Chamberlain has worked on 95 packages so far. In total, Scott Chamberlain has worked with 229 other authors on those packages. This amount of teamwork is mind-blowing! A true legend.

Packages overview

FedData
RNeXML
analogsea
bibtex
bold
brranching
cffr
charlatan
citecorp
ckanr
conditionz
cowsay
crul
dataone
dataspice
datelife
discgolf
elastic
fauxpas
finch
geojson
geojsonio
geojsonlint
getlandsat
ghql
gistr
googleComputeEngineR
gtools
handlr
hoardr
httpcode
httping
isdparser
jaod
jqr
mapr
microdemic
mregions
nasapower
natserv
nodbi
oai
openadds
pangaear
parzer
phylocomr
plotly
pubchunks
randgeo
rbace
rbhl
rbison
rcitoid
rcoreoa
rcrossref
rdatacite
rdryad
rebird
redland
rentrez
request
rerddap
rfigshare
rfishbase
rgbif
rgnparser
ridigbio
ritis
rnoaa
rnpn
rorcid
rotl
rphylopic
rplos
rredlist
rsnps
rvertnet
sbtools
sofa
solrium
spocc
stplanr
suppdata
taxa
taxadb
taxize
taxizedb
traits
tremendousr
vcr
webmockr
wellknown
wikitaxa
worrms
zbank

Package details

FedData

Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources

R. Kyle Bocinsky , Dylan Beaudette , Scott Chamberlain , Jeffrey Hollister , Julia Gustavsen

RNeXML

Semantically Rich I/O for the 'NeXML' Format

Carl Boettiger , Scott Chamberlain , Hilmar Lapp , Kseniia Shumelchyk , Rutger Vos

analogsea

Interface to 'DigitalOcean'

Scott Chamberlain , Hadley Wickham , Winston Chang , Bob Rudis , Bryce Mecum , Mauricio Vargas , RStudio , DigitalOcean

bibtex

Bibtex Parser

Romain Francois , James Joseph Balamuta , Diego Hernangómez , Scott Chamberlain , Kurt Hornik , Brian Ripley , Michael Koohafkan , Mathew W. McLean

bold

Interface to Bold Systems API

Salix Dubois , Scott Chamberlain

brranching

Fetch 'Phylogenies' from Many Sources

Scott Chamberlain

cffr

Generate Citation File Format ('cff') Metadata for R Packages

Diego Hernangómez , João Martins , Scott Chamberlain

charlatan

Make Fake Data

Roel M. Hogervorst , Scott Chamberlain , Kyle Voytovich , Martin Pedersen , Brooke Anderson , Tristan Mahr , rOpenSci

citecorp

Client for the Open Citations Corpus

Scott Chamberlain

ckanr

Client for the Comprehensive Knowledge Archive Network ('CKAN') API

Scott Chamberlain , Imanuel Costigan , Wush Wu , Florian Mayer , Sharla Gelfand , Francisco Alves

conditionz

Control How Many Times Conditions are Thrown

Scott Chamberlain

cowsay

Messages, Warnings, Strings with Ascii Animals

Scott Chamberlain , Amanda Dobbyn , Tyler Rinker , Thomas Leeper , Noam Ross , Rich FitzJohn , Carson Sievert , Kiyoko Gotanda , Andy Teucher , Karl Broman , Franz-Sebastian Krah , Lucy D'Agostino McGowan , Guangchuang Yu , Philipp Boersch-Supan , Andreas Brandmaier , Marion Louveaux

crul

HTTP Client

Scott Chamberlain

dataone

R Interface to the DataONE REST API

Matthew B. Jones , Peter Slaughter , Rob Nahf , Carl Boettiger , Chris Jones , Bryce Mecum , Jeanette Clark , Jordan Read , Lauren Walker , Edmund Hart , Scott Chamberlain , Regents of the University of California

dataspice

Create Lightweight Schema.org Descriptions of Data

Carl Boettiger , Scott Chamberlain , Auriel Fournier , Kelly Hondula , Anna Krystalli , Bryce Mecum , Maëlle Salmon , Kate Webbink , Kara Woo , Irene Steves

datelife

Scientific Data on Time of Lineage Divergence for Your Taxa

Brian O'Meara , Jonathan Eastman , Tracy Heath , April Wright , Klaus Schliep , Scott Chamberlain , Peter Midford , Luke Harmon , Joseph Brown , Matt Pennell , Mike Alfaro , Luna L. Sanchez Reyes , Emily Jane McTavish

discgolf

Discourse API Client

Scott Chamberlain

elastic

General Purpose Interface to 'Elasticsearch'

Scott Chamberlain

fauxpas

HTTP Error Helpers

Scott Chamberlain

finch

Parse Darwin Core Files

Scott Chamberlain

geojson

Classes for 'GeoJSON'

Scott Chamberlain , Jeroen Ooms , Michael Sumner

geojsonio

Convert Data from and to 'GeoJSON' or 'TopoJSON'

Scott Chamberlain , Andy Teucher , Michael Mahoney

geojsonlint

Tools for Validating 'GeoJSON'

Scott Chamberlain , Andy Teucher , Tom MacWright , Mads Kristensen

getlandsat

Get Landsat 8 Data from Amazon Public Data Sets

Scott Chamberlain

ghql

General Purpose 'GraphQL' Client

Scott Chamberlain

gistr

Work with 'GitHub' 'Gists'

Scott Chamberlain , Ramnath Vaidyanathan , Karthik Ram

googleComputeEngineR

R Interface with Google Compute Engine

Mark Edmondson , Scott Chamberlain , Winston Chang , Henrik Bengtsson , Jacki Novik

gtools

Various R Programming Tools

Gregory R. Warnes , Ben Bolker , Thomas Lumley , Arni Magnusson , Bill Venables , Genei Ryodan , Steffen Moeller , Ian Wilson , Mark Davis , Nitin Jain , Scott Chamberlain

handlr

Convert Among Citation Formats

Scott Chamberlain

hoardr

Manage Cached Files

Scott Chamberlain , Tamás Stirling

httpcode

'HTTP' Status Code Helper

Scott Chamberlain

httping

'Ping' 'URLs' to Time 'Requests'

Scott Chamberlain

isdparser

Parse 'NOAA' Integrated Surface Data Files

Scott Chamberlain

jaod

Directory of Open Access Journals Client

Scott Chamberlain , rOpenSci

jqr

Client for 'jq', a 'JSON' Processor

Rich FitzJohn , Jeroen Ooms , Scott Chamberlain , Stefan Milton Bache

mapr

Visualize Species Occurrence Data

Scott Chamberlain

microdemic

'Microsoft Academic' API Client

Scott Chamberlain , Christopher Baker , rOpenSci

mregions

Marine Regions Data from 'Marineregions.org'

Scott Chamberlain , Francois Michonneau , Pieter Provoost , Michael Sumner , Lennert Schepers , Salvador Fernandez

nasapower

NASA POWER API Client

Adam H. Sparks , Scott Chamberlain , Hazel Kavili , Alison Boyer , Fernando Miguez , Maëlle Salmon , Phillip D. Alderman , Aleksandar Blagotić , Gergely Daróczi , Curtin University

natserv

'NatureServe' Interface

Scott Chamberlain , rOpenSci

nodbi

'NoSQL' Database Connector

Ralf Herold , Scott Chamberlain , Rich FitzJohn , Jeroen Ooms

oai

General Purpose 'Oai-PMH' Services Client

Scott Chamberlain , Michal Bojanowski , National Science Centre

openadds

Client to Access 'Openaddresses' Data

Scott Chamberlain

pangaear

Client for the 'Pangaea' Database

Scott Chamberlain , Kara Woo , Andrew MacDonald , Naupaka Zimmerman , Gavin Simpson

parzer

Parse Messy Geographic Coordinates

Scott Chamberlain , Alban Sagouis , Alec L. Robitaille , Maëlle Salmon , Hiroaki Yutani , Jeffrey Bogan , Julien Brun , Maria Munafó , rOpenSci

phylocomr

Interface to 'Phylocom'

Jeroen Ooms , Scott Chamberlain , Cam Webb , David Ackerly , Steven Kembel , Luna Luisa Sanchez Reyes

plotly

Create Interactive Web Graphics via 'plotly.js'

Carson Sievert , Chris Parmer , Toby Hocking , Scott Chamberlain , Karthik Ram , Marianne Corvellec , Pedro Despouy , Salim Brüggemann , Plotly Technologies Inc.

pubchunks

Fetch Sections of XML Scholarly Articles

Scott Chamberlain , rOpenSci

randgeo

Generate Random 'WKT' or 'GeoJSON'

Scott Chamberlain , Noam Ross , Samuel Bosch

rbace

'Bielefeld' Academic Search Engine ('BASE') Client

Scott Chamberlain

rbhl

Interface to the 'Biodiversity' 'Heritage' Library

Scott Chamberlain

rbison

Interface to the 'USGS' 'BISON' API

Scott Chamberlain , rOpenSci

rcitoid

Client for 'Citoid'

Scott Chamberlain

rcoreoa

Client for the CORE API

Scott Chamberlain , Aristotelis Charalampous , Simon Goring

rcrossref

Client for Various 'CrossRef' 'APIs'

Scott Chamberlain , Hao Zhu , Najko Jahn , Carl Boettiger , Karthik Ram

rdatacite

Client for the 'DataCite' API

Scott Chamberlain , Bianca Kramer

rdryad

Access for Dryad Web Services

Karthik Ram , Scott Chamberlain , Carl Boettiger

rebird

R Client for the eBird Database of Bird Observations

Rafael Maia , Scott Chamberlain , Andy Teucher , Guy Babineau , Marianna Foos , David Bradnum , Sebastian Pardo

redland

RDF Library Bindings in R

Matthew B. Jones , Peter Slaughter , Jeroen Ooms , Carl Boettiger , Scott Chamberlain , David Beckett , University of Bristol , Regents of the University of California

rentrez

'Entrez' in R

David Winter , Scott Chamberlain , Han Guangchun

request

High Level 'HTTP' Client

Scott Chamberlain

rerddap

General Purpose Client for 'ERDDAP' Servers

Scott Chamberlain , Ben Tupper , Salvador Jesús Fernández Bejarano , Roy Mendelssohn

rfigshare

An R Interface to 'figshare'

Carl Boettiger , Scott Chamberlain , Karthik Ram , Edmund Hart

rfishbase

R Interface to 'FishBase'

Carl Boettiger , Scott Chamberlain , Duncan Temple Lang , Peter Wainwright , Kevin Cazelles

rgbif

Interface to the Global Biodiversity Information Facility API

Scott Chamberlain , Damiano Oldoni , Vijay Barve , Peter Desmet , Laurens Geffert , Dan Mcglinn , Karthik Ram , rOpenSci , John Waller

rgnparser

Parse Scientific Names

Scott Chamberlain , Joel H. Nitta , Alban Sagouis

ridigbio

Interface to the iDigBio Data API

Francois Michonneau , Matthew Collins , Scott Chamberlain , Kevin Love , Hem Nalini Morzaria-Luna , Michelle L. Gaynor , Jesse Bennett

ritis

Integrated Taxonomic Information System Client

Scott Chamberlain , rOpenSci

rnoaa

'NOAA' Weather Data from R

Scott Chamberlain , Daniel Hocking , Brooke Anderson , Maëlle Salmon , Adam Erickson , Nicholas Potter , Joseph Stachelek , Alex Simmons , Karthik Ram , Hart Edmund , rOpenSci

rnpn

Interface to the National 'Phenology' Network 'API'

Jeff Switzer , Scott Chamberlain , Lee Marsh , Kevin Wong , David LeBauer , Eric R Scott

rorcid

Interface to the 'Orcid.org' API

Scott Chamberlain , rOpenSci

rotl

Interface to the 'Open Tree of Life' API

Francois Michonneau , Joseph Brown , David Winter , Scott Chamberlain

rphylopic

Get Silhouettes of Organisms from PhyloPic

William Gearty , Lewis A. Jones , Scott Chamberlain , David Miller

rplos

Interface to the Search API for 'PLoS' Journals

Scott Chamberlain , Carl Boettiger , Karthik Ram , rOpenSci

rredlist

'IUCN' Red List Client

William Gearty , Scott Chamberlain , rOpenSci , Maëlle Salmon

rsnps

Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web

Julia Gustavsen , Sina Rüeger , Scott Chamberlain , Kevin Ushey , Hao Zhu

rvertnet

Search 'Vertnet', a 'Database' of Vertebrate Specimen Records

Scott Chamberlain , Chris Ray , Vijay Barve , Dave Slager

sbtools

USGS ScienceBase Tools

David Blodgett , Luke Winslow , Scott Chamberlain , Alison Appling , Jordan Read

sofa

Connector to 'CouchDB'

Scott Chamberlain , rOpenSci

solrium

General Purpose R Interface to 'Solr'

Scott Chamberlain , rOpenSci

spocc

Interface to Species Occurrence Data Sources

Hannah Owens , Vijay Barve , Scott Chamberlain , Karthik Ram , Ted Hart , rOpenSci

stplanr

Sustainable Transport Planning

Robin Lovelace , Richard Ellison , Malcolm Morgan , Barry Rowlingson , Nick Bearman , Nikolai Berkoff , Scott Chamberlain , Mark Padgham , Zhao Wang , Andrea Gilardi , Josiah Parry

suppdata

Downloading Supplementary Data from Published Manuscripts

William D. Pearse , Scott Chamberlain , Daniel Nuest , Ross Mounce , Sarah Supp

taxa

Classes for Storing and Manipulating Taxonomic Data

Scott Chamberlain , Zachary Foster

taxadb

A High-Performance Local Taxonomic Database Interface

Carl Boettiger , Kari Norman , Jorrit Poelen , Scott Chamberlain , Noam Ross

taxize

Taxonomic Information from Around the Web

Scott Chamberlain , Eduard Szoecs , Zachary Foster , Zebulun Arendsee , Carl Boettiger , Karthik Ram , Ignasi Bartomeus , John Baumgartner , James O'Donnell , Jari Oksanen , Bastian Greshake Tzovaras , Philippe Marchand , Vinh Tran , Maëlle Salmon , Gaopeng Li , Matthias Grenié , rOpenSci

taxizedb

Tools for Working with 'Taxonomic' Databases

Scott Chamberlain , Zebulun Arendsee , Tamás Stirling

traits

Species Trait Data from Around the Web

Scott Chamberlain , Zachary Foster , Ignasi Bartomeus , David LeBauer , Chris Black , David Harris , Rupert Collins

tremendousr

Easily Send Rewards and Incentives with 'Tremendous' from R

Jonathan Trattner , Scott Chamberlain , R Computing Lab at Wake Forest University

vcr

Record 'HTTP' Calls to Disk

Scott Chamberlain , Aaron Wolen , Maëlle Salmon , Daniel Possenriede , rOpenSci

webmockr

Stubbing and Setting Expectations on 'HTTP' Requests

Scott Chamberlain , Aaron Wolen , rOpenSci

wellknown

Convert Between 'WKT' and 'GeoJSON'

Scott Chamberlain , Os Keyes

wikitaxa

Taxonomic Information from 'Wikipedia'

Scott Chamberlain , Ethan Welty

worrms

World Register of Marine Species (WoRMS) Client

Scott Chamberlain , Bart Vanhoorne.

zbank

'ZooBank' API Client

Scott Chamberlain

Colleagues

R. Kyle Bocinsky
Dylan Beaudette
Jeffrey Hollister
Julia Gustavsen
Carl Boettiger
Hilmar Lapp
Kseniia Shumelchyk
Rutger Vos
Hadley Wickham
Winston Chang
Bob Rudis
Bryce Mecum
Mauricio Vargas
RStudio
DigitalOcean
Romain Francois
James Joseph Balamuta
Diego Hernangómez
Kurt Hornik
Brian Ripley
Michael Koohafkan
Mathew W. McLean
Salix Dubois
João Martins
Roel M. Hogervorst
Kyle Voytovich
Martin Pedersen
Brooke Anderson
Tristan Mahr
rOpenSci
Imanuel Costigan
Wush Wu
Florian Mayer
Sharla Gelfand
Francisco Alves
Amanda Dobbyn
Tyler Rinker
Thomas Leeper
Noam Ross
Rich FitzJohn
Carson Sievert
Kiyoko Gotanda
Andy Teucher
Karl Broman
Franz-Sebastian Krah
Lucy D'Agostino McGowan
Guangchuang Yu
Philipp Boersch-Supan
Andreas Brandmaier
Marion Louveaux
Matthew B. Jones
Peter Slaughter
Rob Nahf
Chris Jones
Jeanette Clark
Jordan Read
Lauren Walker
Edmund Hart
Regents of the University of California
Auriel Fournier
Kelly Hondula
Anna Krystalli
Maëlle Salmon
Kate Webbink
Kara Woo
Irene Steves
Brian O'Meara
Jonathan Eastman
Tracy Heath
April Wright
Klaus Schliep
Peter Midford
Luke Harmon
Joseph Brown
Matt Pennell
Mike Alfaro
Luna L. Sanchez Reyes
Emily Jane McTavish
Jeroen Ooms
Michael Sumner
Michael Mahoney
Tom MacWright
Mads Kristensen
Ramnath Vaidyanathan
Karthik Ram
Mark Edmondson
Henrik Bengtsson
Jacki Novik
Gregory R. Warnes
Ben Bolker
Thomas Lumley
Arni Magnusson
Bill Venables
Genei Ryodan
Steffen Moeller
Ian Wilson
Mark Davis
Nitin Jain
Tamás Stirling
Stefan Milton Bache
Christopher Baker
Francois Michonneau
Pieter Provoost
Lennert Schepers
Salvador Fernandez
Adam H. Sparks
Hazel Kavili
Alison Boyer
Fernando Miguez
Phillip D. Alderman
Aleksandar Blagotić
Gergely Daróczi
Curtin University
Ralf Herold
Michal Bojanowski
National Science Centre
Andrew MacDonald
Naupaka Zimmerman
Gavin Simpson
Alban Sagouis
Alec L. Robitaille
Hiroaki Yutani
Jeffrey Bogan
Julien Brun
Maria Munafó
Cam Webb
David Ackerly
Steven Kembel
Luna Luisa Sanchez Reyes
Chris Parmer
Toby Hocking
Marianne Corvellec
Pedro Despouy
Salim Brüggemann
Plotly Technologies Inc.
Samuel Bosch
Aristotelis Charalampous
Simon Goring
Hao Zhu
Najko Jahn
Bianca Kramer
Rafael Maia
Guy Babineau
Marianna Foos
David Bradnum
Sebastian Pardo
David Beckett
University of Bristol
David Winter
Han Guangchun
Ben Tupper
Salvador Jesús Fernández Bejarano
Roy Mendelssohn
Duncan Temple Lang
Peter Wainwright
Kevin Cazelles
Damiano Oldoni
Vijay Barve
Peter Desmet
Laurens Geffert
Dan Mcglinn
John Waller
Joel H. Nitta
Matthew Collins
Kevin Love
Hem Nalini Morzaria-Luna
Michelle L. Gaynor
Jesse Bennett
Daniel Hocking
Adam Erickson
Nicholas Potter
Joseph Stachelek
Alex Simmons
Hart Edmund
Jeff Switzer
Lee Marsh
Kevin Wong
David LeBauer
Eric R Scott
William Gearty
Lewis A. Jones
David Miller
Sina Rüeger
Kevin Ushey
Chris Ray
Dave Slager
David Blodgett
Luke Winslow
Alison Appling
Hannah Owens
Ted Hart
Robin Lovelace
Richard Ellison
Malcolm Morgan
Barry Rowlingson
Nick Bearman
Nikolai Berkoff
Mark Padgham
Zhao Wang
Andrea Gilardi
Josiah Parry
William D. Pearse
Daniel Nuest
Ross Mounce
Sarah Supp
Zachary Foster
Kari Norman
Jorrit Poelen
Eduard Szoecs
Zebulun Arendsee
Ignasi Bartomeus
John Baumgartner
James O'Donnell
Jari Oksanen
Bastian Greshake Tzovaras
Philippe Marchand
Vinh Tran
Gaopeng Li
Matthias Grenié
Chris Black
David Harris
Rupert Collins
Jonathan Trattner
R Computing Lab at Wake Forest University
Aaron Wolen
Daniel Possenriede
Os Keyes
Ethan Welty
Bart Vanhoorne.